Genome Browser
SNP Information
| dbSNP ID | rs1971509 |
|---|---|
| JSNP ID | - |
| Chromosome | 6 |
| Chromosome Position | 26193756 |
| Strand | - |
| Allele | A/G |
| Validation Class | SNP: single nucleotide polymorphism |
| SNP Effect | POLYPHEN SIFT |
Gene Information
| Type | mRNA Accession | Gene | Strand | mRNA_Pos | Codon_Pos | Protein_Pos | Allele | Codons | AminoAcid |
|---|---|---|---|---|---|---|---|---|---|
| Promoter | NM_000410 | HFE | + | -1732 | - | - | A/G | - | |
| Promoter | NM_139003 | HFE | + | -1732 | - | - | A/G | - | |
| Promoter | NM_139002 | HFE | + | -1732 | - | - | A/G | - | |
| Promoter | NM_139005 | HFE | + | -1732 | - | - | A/G | - | |
| Promoter | NM_139006 | HFE | + | -1732 | - | - | A/G | - | |
| Promoter | NM_139007 | HFE | + | -1732 | - | - | A/G | - | |
| Promoter | NM_139008 | HFE | + | -1732 | - | - | A/G | - | |
| Promoter | NM_139009 | HFE | + | -1732 | - | - | A/G | - | |
| Promoter | NM_139004 | HFE | + | -1732 | - | - | A/G | - | |
| Promoter | NM_139010 | HFE | + | -1732 | - | - | A/G | - | |
| Promoter | NM_139011 | HFE | + | -1732 | - | - | A/G | - |
Disease Information
| Disease Hit | 0 |
|---|---|
| Disease Name | - |
| Others | - |
Disease Information
| dbSNP | JSNP | ALFRED |
|---|---|---|
| - | - | - |
Flanking Sequence
| dbSNP |
|---|
|
>gnl|dbSNP|rs1971509 rs=1971509|pos=361|len=1899|taxid=9606|mol=genomic|class=1|alleles=A/G|build=120 ATGTAGAATATTGATGATGGGCACATTGGGGCTGATAGTACTATTCCTTT TTTTCAATTTTTGGTAAGATATAATTAGCATACCATATAATTCATCTATG TAAAATGCAAAAATTGGCCCGGCTCAGTGGCTCACGCTTGTAATCCCAGC ACTTTGGGCGGCCGAGGAAGGCAGATCACCTGAGATCAGGGGTTCGAGAC CAGCCTGGCCAACATGGTGAAACCCCGTCTTTACTAAAAATACAAAAATT AGCCGGGCGTGATAGCAGGCAACTGTAATCCCAGCTACATTAGAGGCTGA GGCAGGAGAATCGCTTGAACCCGGGAGGCGTAGGTTGCAGTGAGCTAAGA TCGTGCCATC R CACTCCAGCATGGGAGACAAGAGCAAGACTTCATCTCAAAAAAAAAAAAT TAGCTGGGTGTGGTGGCATGCACCTGTAATTCCAGCTACTCGGGAAGCTG AGACAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGTGGTGAGCCGAG ATCATGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCA AAAATAAAATAAATAAAATAAAATGCAAAAATTAATGGATTTTAGTATAT TTACAGAGATGTGCAACCATTACCAAAATTTTACATTTCTATCTCCCCAA AAAGAAACCATGTTCCCCTAATTCAGTACCCTTAATTCATCGCCTCCCAG ATTCCTCCATTCTCCTCCTCCTCCCCTCCCAGCCCTAGACAATCTTTAAT CTACTTTCTTTCTATTTGGAACATTTAGTATACATAGAGGCATATAATAT ATTGCTTTGCCGTGACTGGCTTCTTTCATTTAGCATAATGTTTTTATGTA TGTTTTTCATGGACCAATAATATCTATTATAAGGACATACCACAACATAT TTTATTTATTCATTCATCAGCCGATGGACATTGGTTTGTTTCTACTTTAT GGCTATTGGGAATAGTGCTGTTATAAACATTTATGTACAAGTTTTTTTGT AGACTTATGTTTTGATTTCTTTTGGTTATATATCTAGAAGTGGGTTTGCT GGGTCATATGGTAACACTGTTTAACCTTTTGAGGAATTGCCACATTCTTT TCCAAAGTAAGCATTTTATCCTCCTATCAGCAGTGTATGAGAGTTCTGAT TTCTCTCCATCTTTGCCTGGGTTTTTGAATCAGGGCCCCAGATAGAACAA AAATGTGGTTATTCAGTTGTTCCACCATCACTTGTTGAGAAGACTCTTTT TTCATTGAAGTGTTTTGGCACCCTTATCAAAAATCAATCTACCATAAATG TGAGAGTTTATTTCTGGAGTCTCAATTTTATCCCATTATGCTATAATCTA TAATCCTATCTTTTTTTTTTTTTGACAGAGCCTCACTCTATTGCCCAGGT TGGAGTGCAGTGGCCCAATCCCGGCCACTGGCTCCTCCTCCCAGGTTCAA GCAATTCTCCTGCCTCAGCCTCCCAAGCAGCTGGGATTACAGGTACCTGC CACCATGCCTGGTTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCA TGTTGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCTGCCCACCT CAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACACCCAGACT ATAATCCTATCTTTATGTCAGGACTACACTGTCTTGATTACTATAGCTTT TTAGTAAATTGAATTCAAGAAGTTTCTCAACTTCAAATTTGATCTTTTTT TGGAAGACTATATTAGCTATTCTCAGTCTGCTGAATTTCCCTAGGAATTT TAGGATCTATTATCAATGTCTATTCTATTTTTGTATATGTTTTAATATTT TCATAAGAAACTTTTTTCATTTAAACTTTTTTTTTTAA |
| JSNP |
|
>gnl|dbSNP|rs1971509 rs=1971509|pos=361|len=1899|taxid=9606|mol=genomic|class=1|alleles=A/G|build=120 ATGTAGAATATTGATGATGGGCACATTGGGGCTGATAGTACTATTCCTTT TTTTCAATTTTTGGTAAGATATAATTAGCATACCATATAATTCATCTATG TAAAATGCAAAAATTGGCCCGGCTCAGTGGCTCACGCTTGTAATCCCAGC ACTTTGGGCGGCCGAGGAAGGCAGATCACCTGAGATCAGGGGTTCGAGAC CAGCCTGGCCAACATGGTGAAACCCCGTCTTTACTAAAAATACAAAAATT AGCCGGGCGTGATAGCAGGCAACTGTAATCCCAGCTACATTAGAGGCTGA GGCAGGAGAATCGCTTGAACCCGGGAGGCGTAGGTTGCAGTGAGCTAAGA TCGTGCCATC R CACTCCAGCATGGGAGACAAGAGCAAGACTTCATCTCAAAAAAAAAAAAT TAGCTGGGTGTGGTGGCATGCACCTGTAATTCCAGCTACTCGGGAAGCTG AGACAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGTGGTGAGCCGAG ATCATGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCA AAAATAAAATAAATAAAATAAAATGCAAAAATTAATGGATTTTAGTATAT TTACAGAGATGTGCAACCATTACCAAAATTTTACATTTCTATCTCCCCAA AAAGAAACCATGTTCCCCTAATTCAGTACCCTTAATTCATCGCCTCCCAG ATTCCTCCATTCTCCTCCTCCTCCCCTCCCAGCCCTAGACAATCTTTAAT CTACTTTCTTTCTATTTGGAACATTTAGTATACATAGAGGCATATAATAT ATTGCTTTGCCGTGACTGGCTTCTTTCATTTAGCATAATGTTTTTATGTA TGTTTTTCATGGACCAATAATATCTATTATAAGGACATACCACAACATAT TTTATTTATTCATTCATCAGCCGATGGACATTGGTTTGTTTCTACTTTAT GGCTATTGGGAATAGTGCTGTTATAAACATTTATGTACAAGTTTTTTTGT AGACTTATGTTTTGATTTCTTTTGGTTATATATCTAGAAGTGGGTTTGCT GGGTCATATGGTAACACTGTTTAACCTTTTGAGGAATTGCCACATTCTTT TCCAAAGTAAGCATTTTATCCTCCTATCAGCAGTGTATGAGAGTTCTGAT TTCTCTCCATCTTTGCCTGGGTTTTTGAATCAGGGCCCCAGATAGAACAA AAATGTGGTTATTCAGTTGTTCCACCATCACTTGTTGAGAAGACTCTTTT TTCATTGAAGTGTTTTGGCACCCTTATCAAAAATCAATCTACCATAAATG TGAGAGTTTATTTCTGGAGTCTCAATTTTATCCCATTATGCTATAATCTA TAATCCTATCTTTTTTTTTTTTTGACAGAGCCTCACTCTATTGCCCAGGT TGGAGTGCAGTGGCCCAATCCCGGCCACTGGCTCCTCCTCCCAGGTTCAA GCAATTCTCCTGCCTCAGCCTCCCAAGCAGCTGGGATTACAGGTACCTGC CACCATGCCTGGTTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCA TGTTGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCTGCCCACCT CAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACACCCAGACT ATAATCCTATCTTTATGTCAGGACTACACTGTCTTGATTACTATAGCTTT TTAGTAAATTGAATTCAAGAAGTTTCTCAACTTCAAATTTGATCTTTTTT TGGAAGACTATATTAGCTATTCTCAGTCTGCTGAATTTCCCTAGGAATTT TAGGATCTATTATCAATGTCTATTCTATTTTTGTATATGTTTTAATATTT TCATAAGAAACTTTTTTCATTTAAACTTTTTTTTTTAA |
