Genome Browser
SNP Information
| dbSNP ID | rs1799945 |
|---|---|
| JSNP ID | IMS-JST006702 |
| Chromosome | 6 |
| Chromosome Position | 26199158 |
| Strand | + |
| Allele | C/G |
| Validation Class | SNP: single nucleotide polymorphism |
| SNP Effect | POLYPHEN SIFT |
Gene Information
| Type | mRNA Accession | Gene | Strand | mRNA_Pos | Codon_Pos | Protein_Pos | Allele | Codons | AminoAcid |
|---|---|---|---|---|---|---|---|---|---|
| CDS-nonsynonymous | NM_000410 | HFE | + | 347 | 1 | 63 | C/G | CAT/GAT | H/D |
| CDS-nonsynonymous | NM_139003 | HFE | + | 347 | 1 | 63 | C/G | CAT/GAT | H/D |
| CDS-nonsynonymous | NM_139002 | HFE | + | 347 | 1 | 63 | C/G | CAT/GAT | H/D |
| CDS-nonsynonymous | NM_139005 | HFE | + | 347 | 1 | 63 | C/G | CAT/GAT | H/D |
| CDS-nonsynonymous | NM_139006 | HFE | + | 347 | 1 | 63 | C/G | CAT/GAT | H/D |
| Intron | NM_139007 | HFE | + | - | - | - | C/G | - | |
| Intron | NM_139008 | HFE | + | - | - | - | C/G | - | |
| CDS-nonsynonymous | NM_139009 | HFE | + | 278 | 1 | 40 | C/G | CAT/GAT | H/D |
| CDS-nonsynonymous | NM_139004 | HFE | + | 347 | 1 | 63 | C/G | CAT/GAT | H/D |
| Intron | NM_139010 | HFE | + | - | - | - | C/G | - | |
| Intron | NM_139011 | HFE | + | - | - | - | C/G | - |
Disease Information
| Disease Hit | 0 |
|---|---|
| Disease Name | - |
| Others | - |
Disease Information
| dbSNP | JSNP | ALFRED | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| - | - | ||||||||
Flanking Sequence
| dbSNP |
|---|
|
>gnl|dbSNP|rs1799945 rs=1799945|pos=415|len=941|taxid=9606|mol=genomic|class=1|alleles=C/G|build=126 ACCATGGCTAGACACACCTTAACATTTTCTAGAATCCACCAGCTTTAGTG GAGTCTGTCTAATCATGAGTATTGGAATAGGATCTGGGGGCAGTGAGGGG GTGGCAGCCACGTGTGGCAGAGAAAAGCACACAAGGAAAGAGCACCCAGG ACTGTCATATGGAAGAAAGACAGGACTGCAACTCACCCTTCACAAAATGA GGACCAGACACAGCTGATGGTATGAGTTGATGCAGGTGTGTGGAGCCTCA ACATCCTGCTCCCCTCCTACTACACATGGTTAAGGCCTGTTGCTCTGTCT CCAGGTTCACACTCTCTGCACTACCTCTTCATGGGTGCCTCAGAGCAGGA CCTTGGTCTTTCCTTGTTTGAAGCTTTGGGCTACGTGGATGACCAGCTGT TCGTGTTCTATGAT S ATGAGAGTCGCCGTGTGGAGCCCCGAACTCCATGGGTTTCCAGTAGAATT TCAAGCCAGATGTGGCTGCAGCTGAGTCAGAGTCTGAAAGGGTGGGATCA CATGTTCACTGTTGACTTCTGGACTATTATGGAAAATCACAACCACAGCA AGGGTAYGTGGAGAGGGGGCCTCACCTTCCTGAGGTTGTCAGAGCTTTTC ATCTTTTCATGCATCTTGAAGGAAACAGCTGGAAGTCTGAGGTCTTGTGG GAGCAGGGAAGAGGGAAGGAATTTGCTTCCTGAGATCATTTGGTCCTTGG GGATGGTGGAAATAGGGACCTATTCCTTTGGTTGCAGTTAACAAGGCTGG GGATTTTTCCAGAGTCCCACACCCTGCAGGTCATCCTGGGCTGTGAAATG CAAGAAGACAACAGTACCGAGGGCTACTGGAAGTACGGGTATGATGGGCA GGACCACCTTGAATTCTGCCCTGACACACTGGATTGGAGAGCAGCAGAAC CCAGGGCCTGGCCCACCAAGCTGGAG |
| JSNP |
|
>gnl|dbSNP|rs1799945 rs=1799945|pos=415|len=941|taxid=9606|mol=genomic|class=1|alleles=C/G|build=126 ACCATGGCTAGACACACCTTAACATTTTCTAGAATCCACCAGCTTTAGTG GAGTCTGTCTAATCATGAGTATTGGAATAGGATCTGGGGGCAGTGAGGGG GTGGCAGCCACGTGTGGCAGAGAAAAGCACACAAGGAAAGAGCACCCAGG ACTGTCATATGGAAGAAAGACAGGACTGCAACTCACCCTTCACAAAATGA GGACCAGACACAGCTGATGGTATGAGTTGATGCAGGTGTGTGGAGCCTCA ACATCCTGCTCCCCTCCTACTACACATGGTTAAGGCCTGTTGCTCTGTCT CCAGGTTCACACTCTCTGCACTACCTCTTCATGGGTGCCTCAGAGCAGGA CCTTGGTCTTTCCTTGTTTGAAGCTTTGGGCTACGTGGATGACCAGCTGT TCGTGTTCTATGAT S ATGAGAGTCGCCGTGTGGAGCCCCGAACTCCATGGGTTTCCAGTAGAATT TCAAGCCAGATGTGGCTGCAGCTGAGTCAGAGTCTGAAAGGGTGGGATCA CATGTTCACTGTTGACTTCTGGACTATTATGGAAAATCACAACCACAGCA AGGGTAYGTGGAGAGGGGGCCTCACCTTCCTGAGGTTGTCAGAGCTTTTC ATCTTTTCATGCATCTTGAAGGAAACAGCTGGAAGTCTGAGGTCTTGTGG GAGCAGGGAAGAGGGAAGGAATTTGCTTCCTGAGATCATTTGGTCCTTGG GGATGGTGGAAATAGGGACCTATTCCTTTGGTTGCAGTTAACAAGGCTGG GGATTTTTCCAGAGTCCCACACCCTGCAGGTCATCCTGGGCTGTGAAATG CAAGAAGACAACAGTACCGAGGGCTACTGGAAGTACGGGTATGATGGGCA GGACCACCTTGAATTCTGCCCTGACACACTGGATTGGAGAGCAGCAGAAC CCAGGGCCTGGCCCACCAAGCTGGAG |
