Genome Browser
SNP Information
| dbSNP ID | rs1090949 |
|---|---|
| JSNP ID | - |
| Chromosome | 6 |
| Chromosome Position | 26193375 |
| Strand | - |
| Allele | A/G |
| Validation Class | SNP: single nucleotide polymorphism |
| SNP Effect | POLYPHEN SIFT |
Gene Information
| Type | mRNA Accession | Gene | Strand | mRNA_Pos | Codon_Pos | Protein_Pos | Allele | Codons | AminoAcid |
|---|---|---|---|---|---|---|---|---|---|
| Promoter | NM_000410 | HFE | + | -2113 | - | - | A/G | - | |
| Promoter | NM_139003 | HFE | + | -2113 | - | - | A/G | - | |
| Promoter | NM_139002 | HFE | + | -2113 | - | - | A/G | - | |
| Promoter | NM_139005 | HFE | + | -2113 | - | - | A/G | - | |
| Promoter | NM_139006 | HFE | + | -2113 | - | - | A/G | - | |
| Promoter | NM_139007 | HFE | + | -2113 | - | - | A/G | - | |
| Promoter | NM_139008 | HFE | + | -2113 | - | - | A/G | - | |
| Promoter | NM_139009 | HFE | + | -2113 | - | - | A/G | - | |
| Promoter | NM_139004 | HFE | + | -2113 | - | - | A/G | - | |
| Promoter | NM_139010 | HFE | + | -2113 | - | - | A/G | - | |
| Promoter | NM_139011 | HFE | + | -2113 | - | - | A/G | - |
Disease Information
| Disease Hit | 0 |
|---|---|
| Disease Name | - |
| Others | - |
Disease Information
| dbSNP | JSNP | ALFRED | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| - | - | ||||||||
Flanking Sequence
| dbSNP |
|---|
|
>gnl|dbSNP|rs1090949 rs=1090949|pos=882|len=2138|taxid=9606|mol=genomic|class=1|alleles=A/G|build=100 TGCTCCAAACCTTTACATATCTAGCAAATTCAACAGGCATTATTTTTGTA AGCATGTATGCAAATTTTGGCAATTCAAGAAAATCAAACAGGATATCAGG GCCTCGACTGTAGGCAAACAGATACAATAACATTGGAAACATGTAGAATA TTGATGATGGGCACATTGGGGCTGATAGTACTATTCCTTTTTTTCAATTT TTGGTAAGATATAATTAGCATACCATATAATTCATCTATGTAAAATGCAA AAATTGGCCCGGCTCAGTGGCTCACGCTTGTAATCCCAGCACTTTGGGCG GCCGAGGAAGGCAGATCACCTGAGATCAGGGGTTCGAGACCAGCCTGGCC AACATGGTGAAACCCCGTCTTTACTAAAAATACAAAAATTAGCCGGGCGT GATAGCAGGCAACTGTAATCCCAGCTACATTAGAGGCTGAGGCAGGAGAA TCGCTTGAACCCGGGAGGCGTAGGTTGCAGTGAGCTAAGATCGTGCCATC ACACTCCAGCATGGGAGACAAGAGCAAGACTTCATCTCAAAAAAAAAAAA TTAGCTGGGTGTGGTGGCATGCACCTGTAATTCCAGCTACTCGGGAAGCT GAGACAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGTGGTGAGCCGA GATCATGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTC AAAAATAAAATAAATAAAATAAAATGCAAAAATTAATGGATTTTAGTATA TTTACAGAGATGTGCAACCATTACCAAAATTTTACATTTCTATCTCCCCA AAAAGAAACCATGTTCCCCTAATTCAGTACCCTTAATTCATCGCCTCCCA GATTCCTCCATTCTCCTCCTCCTCCCCTCCC R GCCCTAGACAATCTTTAATCTACTTTCTTTCTATTTGGAACATTTAGTAT ACATAGAGGCATATAATATATTGCTTTGCCGTGACTGGCTTCTTTCATTT AGCATAATGTTTTTATGTATGTTTTTCATGGACCAATAATATCTATTATA AGGACATACCACAACATATTTTATTTATTCATTCATCAGCCGATGGACAT TGGTTTGTTTCTACTTTATGGCTATTGGGAATAGTGCTGTTATAAACATT TATGTACAAGTTTTTTTGTAGACTTATGTTTTGATTTCTTTTGGTTATAT ATCTAGAAGTGGGTTTGCTGGGTCATATGGTAACACTGTTTAACCTTTTG AGGAATTGCCACATTCTTTTCCAAAGTAAGCATTTTATCCTCCTATCAGC AGTGTATGAGAGTTCTGATTTCTCTCCATCTTTGCCTGGGTTTTTGAATC AGGGCCCCAGATAGAACAAAAATGTGGTTATTCAGTTGTTCCACCATCAC TTGTTGAGAAGACTCTTTTTTCATTGAAGTGTTTTGGCACCCTTATCAAA AATCAATCTACCATAAATGTGAGAGTTTATTTCTGGAGTCTCAATTTTAT CCCATTATGCTATAATCTATAATCCTATCTTTTTTTTTTTTTGACAGAGC CTCACTCTATTGCCCAGGTTGGAGTGCAGTGGCCCAATCCCGGCCACTGG CTCCTCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGCAGC TGGGATTACAGGTACCTGCCACCATGCCTGGTTAATTTTTGTATTTTTAG TAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTGGAACTCCTGACC TCAGGTGATCTGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCAT GAGCCACCACACCCAGACTATAATCCTATCTTTATGTCAGGACTACACTG TCTTGATTACTATAGCTTTTTAGTAAATTGAATTCAAGAAGTTTCTCAAC TTCAAATTTGATCTTTTTTTGGAAGACTATATTAGCTATTCTCAGTCTGC TGAATTTCCCTAGGAATTTTAGGATCTATTATCAATGTCTATTCTATTTT TGTATATGTTTTAATATTTTCATAAGAAACTTTTTTCATTTAAACTTTTT TTTTTAAGAAAAATAGTGAAAATCAGAACACTGGGGGTCAGGCGCATTTA ACAGGCAGAAGAAGAATAAAAACTTGTCATATAAACAAAAAAGAAATGAC CAATCA |
| JSNP |
|
>gnl|dbSNP|rs1090949 rs=1090949|pos=882|len=2138|taxid=9606|mol=genomic|class=1|alleles=A/G|build=100 TGCTCCAAACCTTTACATATCTAGCAAATTCAACAGGCATTATTTTTGTA AGCATGTATGCAAATTTTGGCAATTCAAGAAAATCAAACAGGATATCAGG GCCTCGACTGTAGGCAAACAGATACAATAACATTGGAAACATGTAGAATA TTGATGATGGGCACATTGGGGCTGATAGTACTATTCCTTTTTTTCAATTT TTGGTAAGATATAATTAGCATACCATATAATTCATCTATGTAAAATGCAA AAATTGGCCCGGCTCAGTGGCTCACGCTTGTAATCCCAGCACTTTGGGCG GCCGAGGAAGGCAGATCACCTGAGATCAGGGGTTCGAGACCAGCCTGGCC AACATGGTGAAACCCCGTCTTTACTAAAAATACAAAAATTAGCCGGGCGT GATAGCAGGCAACTGTAATCCCAGCTACATTAGAGGCTGAGGCAGGAGAA TCGCTTGAACCCGGGAGGCGTAGGTTGCAGTGAGCTAAGATCGTGCCATC ACACTCCAGCATGGGAGACAAGAGCAAGACTTCATCTCAAAAAAAAAAAA TTAGCTGGGTGTGGTGGCATGCACCTGTAATTCCAGCTACTCGGGAAGCT GAGACAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGTGGTGAGCCGA GATCATGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTC AAAAATAAAATAAATAAAATAAAATGCAAAAATTAATGGATTTTAGTATA TTTACAGAGATGTGCAACCATTACCAAAATTTTACATTTCTATCTCCCCA AAAAGAAACCATGTTCCCCTAATTCAGTACCCTTAATTCATCGCCTCCCA GATTCCTCCATTCTCCTCCTCCTCCCCTCCC R GCCCTAGACAATCTTTAATCTACTTTCTTTCTATTTGGAACATTTAGTAT ACATAGAGGCATATAATATATTGCTTTGCCGTGACTGGCTTCTTTCATTT AGCATAATGTTTTTATGTATGTTTTTCATGGACCAATAATATCTATTATA AGGACATACCACAACATATTTTATTTATTCATTCATCAGCCGATGGACAT TGGTTTGTTTCTACTTTATGGCTATTGGGAATAGTGCTGTTATAAACATT TATGTACAAGTTTTTTTGTAGACTTATGTTTTGATTTCTTTTGGTTATAT ATCTAGAAGTGGGTTTGCTGGGTCATATGGTAACACTGTTTAACCTTTTG AGGAATTGCCACATTCTTTTCCAAAGTAAGCATTTTATCCTCCTATCAGC AGTGTATGAGAGTTCTGATTTCTCTCCATCTTTGCCTGGGTTTTTGAATC AGGGCCCCAGATAGAACAAAAATGTGGTTATTCAGTTGTTCCACCATCAC TTGTTGAGAAGACTCTTTTTTCATTGAAGTGTTTTGGCACCCTTATCAAA AATCAATCTACCATAAATGTGAGAGTTTATTTCTGGAGTCTCAATTTTAT CCCATTATGCTATAATCTATAATCCTATCTTTTTTTTTTTTTGACAGAGC CTCACTCTATTGCCCAGGTTGGAGTGCAGTGGCCCAATCCCGGCCACTGG CTCCTCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGCAGC TGGGATTACAGGTACCTGCCACCATGCCTGGTTAATTTTTGTATTTTTAG TAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTGGAACTCCTGACC TCAGGTGATCTGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCAT GAGCCACCACACCCAGACTATAATCCTATCTTTATGTCAGGACTACACTG TCTTGATTACTATAGCTTTTTAGTAAATTGAATTCAAGAAGTTTCTCAAC TTCAAATTTGATCTTTTTTTGGAAGACTATATTAGCTATTCTCAGTCTGC TGAATTTCCCTAGGAATTTTAGGATCTATTATCAATGTCTATTCTATTTT TGTATATGTTTTAATATTTTCATAAGAAACTTTTTTCATTTAAACTTTTT TTTTTAAGAAAAATAGTGAAAATCAGAACACTGGGGGTCAGGCGCATTTA ACAGGCAGAAGAAGAATAAAAACTTGTCATATAAACAAAAAAGAAATGAC CAATCA |
